Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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umi duplex alignment fastq workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/umi_duplex_alignment.cwl Branch/Commit ID: 0fae6bb8a15c634b054ec747e31bdfbc67954c92 |
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811.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/811.cwl Branch/Commit ID: 20f01e04328537714e57d136e242d3e7a9d44266 |
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Subsample BAM file creating a tagAlign and pseudoreplicates
This workflow creates a subsample from a BAM file creating a tagAlign and pseudoreplicates |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/File-formats/subample-pseudoreplicates.cwl Branch/Commit ID: 7364aa3799fd3bd7584049228618301bda53a3af |
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wgs alignment and tumor-only variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/wgs.cwl Branch/Commit ID: 767e3dc7448da5bc44e4817c4161f6e4530032e2 |
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rna amplicon analysis for fasta files
RNAs - qc, preprocess, annotation, index, abundance |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/amplicon-fasta.workflow.cwl Branch/Commit ID: 7797879b801042984b5ae651754815fc3f77ea41 |
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wf-loadContents3.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/wf-loadContents3.cwl Branch/Commit ID: b60a42e3cc417c5b75b88fd7c6681abcc7ff5b89 |
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Detect Variants workflow
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https://github.com/ChrisMaherLab/PACT.git
Path: pipelines/snv_indel_post_processing.cwl Branch/Commit ID: master |
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tt_kmer_compare_wnode
Pairwise comparison |
https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_compare_wnode.cwl Branch/Commit ID: dev |
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genotypegvcfs.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/variant_calling/genotypegvcfs.cwl Branch/Commit ID: d777030ca3654fe78462ee69adcbd8221303b006 |
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mut2.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/mut2.cwl Branch/Commit ID: 4700fbee9a5a3271eef8bc9ee595619d0720431b |
