Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph final_filtering

Final filtering

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/final_filtering.cwl

Branch/Commit ID: d2314468d2d2ec177d278899820de1cbfe8c8fb6
workflow graph Apply filters to VCF file

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/germline_filter_vcf.cwl

Branch/Commit ID: fbeea265295ae596d5a3ba563e766be0c4fc26e8
workflow graph tophat2-cufflinks_wf_se.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/tophat2-cufflinks/single_end/tophat2-cufflinks_wf_se.cwl

Branch/Commit ID: 14c76e15665ef0566eae5c2be75dba7feb74a50b
workflow graph kmer_cache_store

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_cache_store.cwl

Branch/Commit ID: 6fad27f92dd604eca0e341178f594a560d70953b
workflow graph umi per-lane alignment subworkflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/umi_alignment.cwl

Branch/Commit ID: 25eab0390f6866ce491b44c89d9e0435d228ab6f
workflow graph salmon_wf_se.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/salmon/single_end/salmon_wf_se.cwl

Branch/Commit ID: 14c76e15665ef0566eae5c2be75dba7feb74a50b
workflow graph kmer_ref_compare_wnode

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_ref_compare_wnode.cwl

Branch/Commit ID: 7ebb8d2757914d16520b00571a281e2ad86a42cf
workflow graph Filter single sample sv vcf from paired read callers(Manta/Smoove)

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/sv_paired_read_caller_filter.cwl

Branch/Commit ID: ef7f3345b352319ec22dffba26c79df033b141f9
workflow graph prefactor_calibrator.cwl

https://git.astron.nl/eosc/prefactor3-cwl.git

Path: workflows/prefactor_calibrator.cwl

Branch/Commit ID: fd7749331db2e416bf8d19083edec09ba7265690
workflow graph HBA_target.cwl

https://git.astron.nl/eosc/prefactor3-cwl.git

Path: workflows/HBA_target.cwl

Branch/Commit ID: fd7749331db2e416bf8d19083edec09ba7265690