Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 8c4e7372247a7f4ed9ed478ef8ea1d239bc88af0
	HS Metrics workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/hs_metrics.cwl Branch/Commit ID: 4aba7c6591c2f1ebd827a36d325a58738c429bea
	varscan somatic workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan.cwl Branch/Commit ID: 8c4e7372247a7f4ed9ed478ef8ea1d239bc88af0
	1st-workflow.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/1st-workflow.cwl Branch/Commit ID: 07ebbea2bdf97955060c1dd563580b386388519b
	run-best-alg-by-cor.cwl	https://github.com/PNNL-CompBio/decomprolute.git Path: metrics/mrna-prot/run-best-alg-by-cor.cwl Branch/Commit ID: 102f6c7259c126e58d733aac476386afe0f20b73
	umi per-lane alignment subworkflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: 4aba7c6591c2f1ebd827a36d325a58738c429bea
	03-local-deconv-cor.cwl	https://github.com/PNNL-CompBio/decomprolute.git Path: localData/03-local-deconv-cor.cwl Branch/Commit ID: 6351764c74a44fc4fa2042d31c0cedde5a5bdbe9
	adapter for sequence_align_and_tag Some workflow engines won't stage files in our nested structure, so parse it out here	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sequence_align_and_tag_adapter.cwl Branch/Commit ID: 4aba7c6591c2f1ebd827a36d325a58738c429bea
	1st-workflow.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/1st-workflow.cwl Branch/Commit ID: c7c379948c02ba8f048d157f06eb903b1bda9894
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 4aba7c6591c2f1ebd827a36d325a58738c429bea