Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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exome alignment and germline variant detection, with optitype for HLA typing
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome_hla_typing.cwl Branch/Commit ID: 742dbafb5fb103d8578f48a0576c14dd8dae3b2a |
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exome alignment and germline variant detection, with optitype for HLA typing
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome_hla_typing.cwl Branch/Commit ID: e8b7759826df40b8bb821b40b15aea960a4951c4 |
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Immunotherapy Workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/immuno.cwl Branch/Commit ID: 3bb0693076adc1543079a6b136c74906ad546ac6 |
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secret_wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/secret_wf.cwl Branch/Commit ID: 886a6ac41c685f20d39e352f9c657e59f3312265 |
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Running cellranger count and lineage inference
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/single_cell_rnaseq.cwl Branch/Commit ID: cfdcd0735e8fb1ac0b97f1a5cbe0cc7e00033dd0 |
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alignment for mouse with qc
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/alignment_wgs_mouse.cwl Branch/Commit ID: 9161ef43f7bf0e22b365fde9ec92edcb8601798e |
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exome alignment and germline variant detection
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https://github.com/genome/cancer-genomics-workflow.git
Path: germline_exome_workflow.cwl Branch/Commit ID: e027d487e5cefba4f446f2036b933955608dbc31 |
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Exome QC workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl Branch/Commit ID: 3bb0693076adc1543079a6b136c74906ad546ac6 |
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sec-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/sec-wf.cwl Branch/Commit ID: 886a6ac41c685f20d39e352f9c657e59f3312265 |
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gathered exome alignment and somatic variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome_gathered.cwl Branch/Commit ID: 9161ef43f7bf0e22b365fde9ec92edcb8601798e |
