Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	samtools_sort	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/samtools_sort.cwl Branch/Commit ID: c3fd9c28e495c9bb7e3a8db53ed564b18d718b2a
	Immunotherapy Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/immuno.cwl Branch/Commit ID: a08de598edc04f340fdbff76c9a92336a7702022
	picard_markduplicates Mark duplicates	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/picard_markduplicates.cwl Branch/Commit ID: c3fd9c28e495c9bb7e3a8db53ed564b18d718b2a
	cnv_manta CNV Manta calling	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/cnv_manta.cwl Branch/Commit ID: c3fd9c28e495c9bb7e3a8db53ed564b18d718b2a
	bwa_mem	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/bwa_mem.cwl Branch/Commit ID: c3fd9c28e495c9bb7e3a8db53ed564b18d718b2a
	wf_get_peaks_trim_partial_se.cwl	https://github.com/YeoLab/eclip.git Path: cwl/wf_get_peaks_trim_partial_se.cwl Branch/Commit ID: 49a9bcda10de8f55fab2481f424eb9cdf2e5b256
	bwa_index	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/bwa_index.cwl Branch/Commit ID: c3fd9c28e495c9bb7e3a8db53ed564b18d718b2a
	cnv_gridss CNV GRIDSS calling	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/cnv_gridss.cwl Branch/Commit ID: c3fd9c28e495c9bb7e3a8db53ed564b18d718b2a
	samtools_view_sam2bam	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/samtools_view_sam2bam.cwl Branch/Commit ID: c3fd9c28e495c9bb7e3a8db53ed564b18d718b2a
	cnv_codex CNV CODEX2 calling	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/cnv_codex.cwl Branch/Commit ID: c3fd9c28e495c9bb7e3a8db53ed564b18d718b2a