Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
kmer_ref_compare_wnode
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_ref_compare_wnode.cwl Branch/Commit ID: 8fbfb03088968846bb2c0a79ac50b231b43db64f |
|
|
|
wf_clipseqcore_trim_partial_se_1barcode.cwl
|
https://github.com/YeoLab/eclip.git
Path: cwl/wf_clipseqcore_trim_partial_se_1barcode.cwl Branch/Commit ID: 49a9bcda10de8f55fab2481f424eb9cdf2e5b256 |
|
|
|
kmer_ref_compare_wnode
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_ref_compare_wnode.cwl Branch/Commit ID: d39017c63dd8e088f1ad3809d709529df602e05f |
|
|
|
final_filtering
Final filtering |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/subworkflows/final_filtering.cwl Branch/Commit ID: c3fd9c28e495c9bb7e3a8db53ed564b18d718b2a |
|
|
|
samtools_sort
|
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/subworkflows/samtools_sort.cwl Branch/Commit ID: c3fd9c28e495c9bb7e3a8db53ed564b18d718b2a |
|
|
|
Immunotherapy Workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/immuno.cwl Branch/Commit ID: a08de598edc04f340fdbff76c9a92336a7702022 |
|
|
|
picard_markduplicates
Mark duplicates |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/subworkflows/picard_markduplicates.cwl Branch/Commit ID: c3fd9c28e495c9bb7e3a8db53ed564b18d718b2a |
|
|
|
cnv_manta
CNV Manta calling |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/subworkflows/cnv_manta.cwl Branch/Commit ID: c3fd9c28e495c9bb7e3a8db53ed564b18d718b2a |
|
|
|
bwa_mem
|
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/subworkflows/bwa_mem.cwl Branch/Commit ID: c3fd9c28e495c9bb7e3a8db53ed564b18d718b2a |
|
|
|
wf_get_peaks_trim_partial_se.cwl
|
https://github.com/YeoLab/eclip.git
Path: cwl/wf_get_peaks_trim_partial_se.cwl Branch/Commit ID: 49a9bcda10de8f55fab2481f424eb9cdf2e5b256 |
