Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	SoupX Estimate SoupX Estimate ==============	https://github.com/datirium/workflows.git Path: workflows/soupx.cwl Branch/Commit ID: e45ab1b9ac5c9b99fdf7b3b1be396dc42c2c9620
	CNV_pipeline	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/workflow.cwl Branch/Commit ID: 3bb03c9bac5b2150632d008aec28fb27c510e908
	Run tRNAScan	https://github.com/ncbi/pgap.git Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: 9362082213e20315f76f6f5c235cac3aae565747
	Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: 9362082213e20315f76f6f5c235cac3aae565747
	SV filtering workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/filter_sv_vcf.cwl Branch/Commit ID: f9600f9959acdc30259ba7e64de61104c9b01f0b
	workflow-phmmer-blast.cwl	https://github.com/ebi-wp/webservice-cwl.git Path: workflows/workflow-phmmer-blast.cwl Branch/Commit ID: 5df6b762980b15b0f6389149311b82bdd6dff37d
	assemble.cwl Assemble a set of reads using SKESA	https://github.com/ncbi/pgap.git Path: assemble.cwl Branch/Commit ID: 9362082213e20315f76f6f5c235cac3aae565747
	samples_fillout_workflow.cwl Workflow to run GetBaseCountsMultiSample fillout on a number of samples, each with their own bam and maf files	https://github.com/mskcc/pluto-cwl.git Path: cwl/samples_fillout_workflow.cwl Branch/Commit ID: d8a8af9fdb69c0a4003680c1d3b96f35d5e48f0e
	count-lines9-wf.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/count-lines9-wf.cwl Branch/Commit ID: e515226f8ac0f7985cd94dae4a301150adae3050
	Dockstore.cwl This is a description	https://github.com/kathy-t/test-authors.git Path: Dockstore.cwl Branch/Commit ID: ad572ad13a99d9e33e2313cfe54ee638ea73c726