Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph wf.cwl

https://github.com/ResearchObject/runcrate.git

Path: cwl/multisource/wf.cwl

Branch/Commit ID: f9b20fdd7e0b76738845b4eff3435b3a37fa049f
workflow graph autosubmit.cwl

An example workflow created using Autosubmit's basic a000 workflow as reference. The `platform.yml` is ignored as it contains only information about platforms (e.g. it could be given to a tool like Troika as-is). `expdef.yml` and `autosubmit.yml` basically provide CWL inputs. `jobs.yml` contains the steps of the CWL workflow, with their dependencies. In CWL dependencies are specified via inputs and outputs. When task A outputs a value X, and task B has an input of type A/X, then the dependency A -> B is created in CWl. This is different than Autosubmit, and needs some care to guarantee the correct order in the workflow graph of start dates, members, chunks, etc.

https://github.com/kinow/kinoshita.eti.br.git

Path: notes/autosubmit/autosubmit.cwl

Branch/Commit ID: 5fab4b3e06f18f82898cb252213f6292179a9956
workflow graph format-maf

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/portal-formatting.cli/1.0.0/format-maf.cwl

Branch/Commit ID: 2.4.x
workflow graph download_fastq.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/utils/download_fastq.cwl

Branch/Commit ID: master
workflow graph Africapolis.cwl#main

https://github.com/LoloGruber/fishnet.git

Path: cwl/africapolis/Africapolis.cwl

Branch/Commit ID: a52a1c2283359b96c3728cb248f15c40988a42bd

Packed ID: main
workflow graph accessioning-prediction_subwf.cwl

https://github.com/kinow/pipeline-v5.git

Path: workflows/subworkflows/assembly/accessioning-prediction_subwf.cwl

Branch/Commit ID: eosc-life-gos
workflow graph canine_sequenza_module.cwl

https://github.com/d3b-center/canine-dev.git

Path: subworkflows/canine_sequenza_module.cwl

Branch/Commit ID: 7da5645975f5712362cce7908d2ab138e05876fb
workflow graph 811.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/811.cwl

Branch/Commit ID: 912282ed4d528aa33c33b8a8d99e6992b6ded760
workflow graph Hello World

Puts a message into a file using echo

 https://github.com/markrobbo/workflows.git

Path: workflows/hello/hello.cwl

Branch/Commit ID: master

Packed ID: main
workflow graph trick_revsort.cwl

Reverse the lines in a document, then sort those lines.

 https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/trick_revsort.cwl

Branch/Commit ID: 912282ed4d528aa33c33b8a8d99e6992b6ded760