Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	cram_to_bam workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cram_to_bam_and_index.cwl Branch/Commit ID: d3e4bf55753cd92f97537c7d701187ea92d1e5f0
	Detect Docm variants	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: 509938802c5e42bb8084c6a5a26ab6425c60e69a
	schemadef-wf.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/schemadef-wf.cwl Branch/Commit ID: 368b562a1449e8cd39ae8b7f05926b2bfb9b22df
	Unaligned BAM to BQSR and VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_bqsr_no_dup_marking.cwl Branch/Commit ID: 06d2440d115b446c299b4ce96e8812d2f8df86ec
	bam to trimmed fastqs and biscuit alignments	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: 74647cc0f1abac4ee22950cfa89c44cf2ca3cffd
	bam to trimmed fastqs and HISAT alignments	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: 54846feabbf008c1946db2a86d87252e0edd95b0
	downsample unaligned BAM and align	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: f45b52a24c7b54a75368dcbab24b4eb2c5a9c75a
	Run pindel on provided region	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: 509938802c5e42bb8084c6a5a26ab6425c60e69a
	umi molecular alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/molecular_alignment.cwl Branch/Commit ID: f0cdc773e31e4aa116838e8aba4954c31bd3d68b
	kmer_top_n	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_kmer_top_n.cwl Branch/Commit ID: bf7e02ee89d1bb18462cefdbe0db41b09fe75236