Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	wf-alignment.cwl	https://github.com/bcbio/bcbio_validation_workflows.git Path: giab-chm/giab-chm-workflow/wf-alignment.cwl Branch/Commit ID: af9a5621efcb44c249697d6df071fe4defe389ac
	Gathered Downsample and HaplotypeCaller	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/gathered_downsample_and_recall.cwl Branch/Commit ID: 7638b3075863ae8172f4adaec82fb2eb8e80d3d5
	Chipseq alignment for nonhuman with qc and creating homer tag directory	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/chipseq_alignment_nonhuman.cwl Branch/Commit ID: 7638b3075863ae8172f4adaec82fb2eb8e80d3d5
	Whole genome alignment and somatic variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/somatic_wgs.cwl Branch/Commit ID: 7638b3075863ae8172f4adaec82fb2eb8e80d3d5
	format_rrnas_from_seq_entry	https://github.com/ncbi/pgap.git Path: task_types/tt_format_rrnas_from_seq_entry.cwl Branch/Commit ID: 02816f0d66e36c8eeba02d211cc90e36bf1c9df5
	wf-alignment.cwl	https://github.com/bcbio/bcbio_validation_workflows.git Path: somatic-lowfreq/pisces-titr-workflow/wf-alignment.cwl Branch/Commit ID: af9a5621efcb44c249697d6df071fe4defe389ac
	Trim and reformat reads (single and paired end version)	https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git Path: workflows/trim_and_reformat_reads.cwl Branch/Commit ID: ecf044f3a5a7589cb2238487a19f22863c2bcdb1
	align_sort_sa	https://github.com/ncbi/pgap.git Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: a79cec2331b3e17e382e8e5040405e8dd750c639
	kmer_build_tree	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_build_tree.cwl Branch/Commit ID: a402541b8530f30eab726c160da90a23036847a1
	extract_gencoll_ids	https://github.com/ncbi/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: a79cec2331b3e17e382e8e5040405e8dd750c639