Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph exome alignment and germline variant detection, with optitype for HLA typing

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/germline_exome_hla_typing.cwl

Branch/Commit ID: 2ae0a374fab650757cdae4391c8cbd32f02edf97
workflow graph cluster_blastp_wnode and gpx_qdump combined

https://github.com/ncbi/pgap.git

Path: task_types/tt_cluster_and_qdump.cwl

Branch/Commit ID: 47ccbd0bc7b45bf8b3c92d0a66c1a9a232367a5d
workflow graph tt_hmmsearch_wnode.cwl

https://github.com/ncbi-gpipe/pgap.git

Path: task_types/tt_hmmsearch_wnode.cwl

Branch/Commit ID: 71e3a42eadc007b66ef4689086530dfc3123d32f
workflow graph exome alignment and somatic variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/somatic_exome_mouse.cwl

Branch/Commit ID: 42c66dd24ce5026d3f717214ddb18b7b4fae93cf
workflow graph scatter-valuefrom-wf4.cwl#main

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf4.cwl

Branch/Commit ID: 819c81af5449ec912bbbbead042ad66b8d3fd8d4

Packed ID: main
workflow graph somatic_subpipeline.cwl

https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git

Path: janis_pipelines/wgs_somatic/cwl/tools/somatic_subpipeline.cwl

Branch/Commit ID: 1d45492ae0085824a7ac532d0dfa6621c1cbe415
workflow graph Modification_workflow.cwl

https://github.com/adamscharlotte/CWL-workflow.git

Path: Modification_workflow.cwl

Branch/Commit ID: af5d00cd0e43fdf914714056a499edf2d61454d4
workflow graph Per-region pindel

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/pindel_cat.cwl

Branch/Commit ID: 2decd55996b912feb48be5db1b052aa3274ee405
workflow graph cat_fastq.cwl

https://github.com/ngs-mstb/micgent.git

Path: python/lib/MICGENT/data/cwl/cat_fastq.cwl

Branch/Commit ID: 0be1abb140bfad17f8a166d0c804fb1e9ad64537
workflow graph Hello World

Puts a message into a file using echo

 https://github.com/common-workflow-language/workflows.git

Path: workflows/hello/hello-param.cwl

Branch/Commit ID: 933bf2a1a1cce32d88f88f136275535da9df0954

Packed ID: main