Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Align reference proteins plane complete workflow	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_protein_alignment.cwl Branch/Commit ID: 2d54b11cc9891c9aa52515fe4f8cd9cba12c6629
	bam to trimmed fastqs and biscuit alignments	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: 3b6d0475c80f5e452793a46a38ee188742b86595
	env-wf1.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/env-wf1.cwl Branch/Commit ID: beab66d649dd3ee82a013322a5e830875e8556ba
	functional analysis prediction with InterProScan	https://github.com/proteinswebteam/ebi-metagenomics-cwl.git Path: workflows/functional_analysis.cwl Branch/Commit ID: 0cd2d70d63a8ceb2de28f0faac19c919a7bd35ff
	Merge, annotate, and generate a TSV for SVs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: f77a920bcc73f6cfdb091eed75a149d02cd8a263
	Iden_w.cwl	https://github.com/adamscharlotte/CWL-workflow.git Path: Iden_w.cwl Branch/Commit ID: 1272d1cddc990657ea486c0cade7832e411fa66a
	nestedworkflows.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/examples/nestedworkflows.cwl Branch/Commit ID: bf93dd3e6e3261e1455530984ce045f283535d17
	Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: b174aec5dba5524367061a2c60472c318430f4f5
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: 2979b565f88ceebca934611adbf3fb8cefd65a19
	Apply filters to VCF file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/filter_vcf_mouse.cwl Branch/Commit ID: 3042812447d9e8889c6118986490e9c9b9b13223