Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph exome alignment and germline variant detection, with optitype for HLA typing

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/germline_exome_hla_typing.cwl

Branch/Commit ID: 3b6d0475c80f5e452793a46a38ee188742b86595
workflow graph preprocess.cwl

https://github.com/epigenomics-screw/screw.git

Path: cwl/preprocess.cwl

Branch/Commit ID: eca4d48b08fef0a81518ce3441ed47fcfff412a6
workflow graph scatter GATK HaplotypeCaller over intervals

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl

Branch/Commit ID: 038cb3617a1966a1057386adcde97ce55d9e1139
workflow graph 01-qc-se.cwl

ATAC-seq 01 QC - reads: SE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/01-qc-se.cwl

Branch/Commit ID: 4e568335133405d28f4b73ae11e7f51f2900dfa3
workflow graph nc_rna_workflow.cwl

https://github.com/mb1069/rfam-production.git

Path: cwl/workflows/nc_rna_workflow.cwl

Branch/Commit ID: cbb7bd8985dc8dd3e81f2e885879c0ac90387b4e
workflow graph TAP

https://github.com/MG-RAST/amplicon.git

Path: CWL/Workflows/tap.prok.workflow.cwl

Branch/Commit ID: 67fc58a072d6a72658a54244f6dded172f57314c
workflow graph HS Metrics workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/hs_metrics.cwl

Branch/Commit ID: 00df82a529a58d362158110581e1daa28b4d7ecb
workflow graph workflow.cwl

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: flow_dispatch/2blat/workflow.cwl

Branch/Commit ID: 39b1d1a39a2ccdadd52db15b41422ecccc66e605
workflow graph kfdrc_process_pe_readslist2.cwl

https://github.com/kids-first/kf-alignment-workflow.git

Path: subworkflows/kfdrc_process_pe_readslist2.cwl

Branch/Commit ID: f656d2d32200bee9d3b001af03d5c8b3d5fcb3a7
workflow graph workflow.cwl

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: flow_dispatch/2working_files/workflow.cwl

Branch/Commit ID: 39b1d1a39a2ccdadd52db15b41422ecccc66e605