Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: b38b0070edf910984f29a4a495b5dfa525b8b305
	spurious_annot	https://github.com/ncbi/pgap.git Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: b38b0070edf910984f29a4a495b5dfa525b8b305
	FASTQ to BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/fastq_to_bqsr.cwl Branch/Commit ID: 2e0562a5c3cd7aac24af4c622a5ae68a7fb23a71
	Align reference proteins plane complete workflow	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_protein_alignment.cwl Branch/Commit ID: b38b0070edf910984f29a4a495b5dfa525b8b305
	kmer_cache_retrieve	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: 6ac47e5703d8c8cdac698de91143829b3911e9b2
	kmer_cache_store	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: 8dcf1cc79ea26e9fec999e77ceae1aebfff2cff6
	kmer_build_tree	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_build_tree.cwl Branch/Commit ID: 94c97cfc95a5bf102a6f9206e045ea1afb768317
	kfdrc-jointgenotyping-refinement-workflow.cwl	https://github.com/kids-first/kf-jointgenotyping-workflow.git Path: workflow/kfdrc-jointgenotyping-refinement-workflow.cwl Branch/Commit ID: 3fc9fa02641233d3bf6e33b2649e977b2baa461b
	sequence (bam or fastqs) to trimmed fastqs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sequence_to_trimmed_fastq.cwl Branch/Commit ID: b8000c793d6e7ce4d690406c4f914c5c62acd51f
	extract_gencoll_ids	https://github.com/ncbi/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 6ac47e5703d8c8cdac698de91143829b3911e9b2