Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	03-map-se.cwl ATAC-seq 03 mapping - reads: SE	https://github.com/Duke-GCB/GGR-cwl.git Path: v1.0/ATAC-seq_pipeline/03-map-se.cwl Branch/Commit ID: 8aabde14169421a7115c5cd48c4740b3a7bd818f
	vecscreen.cwl	https://github.com/ncbi/pgap.git Path: vecscreen/vecscreen.cwl Branch/Commit ID: a402541b8530f30eab726c160da90a23036847a1
	Compute library complexity This workflow compute library complexity	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/File-formats/bedtools-bam-pbc.cwl Branch/Commit ID: 0207b0171ab142dfb85db9c39050c5b4be51dd9e
	tt_kmer_top_n.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_top_n.cwl Branch/Commit ID: b38b0070edf910984f29a4a495b5dfa525b8b305
	collate_unique_SSU_headers.cwl	https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: ecf044f3a5a7589cb2238487a19f22863c2bcdb1
	Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 457e101e3fb87e7fd792357afce00ed8ccbfbcdb
	tt_kmer_top_n.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_top_n.cwl Branch/Commit ID: 94c97cfc95a5bf102a6f9206e045ea1afb768317
	RNA-Seq alignment and transcript/gene abundance workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/rnaseq.cwl Branch/Commit ID: b8000c793d6e7ce4d690406c4f914c5c62acd51f
	transcriptome_assemble.cwl	https://github.com/pitagora-network/DAT2-cwl.git Path: workflow/transcriptome_assemble/transcriptome_assemble.cwl Branch/Commit ID: 358d08c5b7e9723b8eadd3149b58c0f5654d18c9
	BAM to BEDPE Comvert BAM to BEDPE and compress the output	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/File-formats/bamtobedpe-gzip.cwl Branch/Commit ID: 92c23571bd5925c3d33678bc944a8546597cf3a3