Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 5f120e5bc3c0f75bfbc636ea2c6f4393f5d45ca1
	js_output_workflow.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/js_output_workflow.cwl Branch/Commit ID: 65aedc5e7e1f3ccace7f9022f8a54b3f0d5c9a8c
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_exome_gvcf.cwl Branch/Commit ID: bed420556091b7b8b45cf20a95e5947e1de9a416
	secret_wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/secret_wf.cwl Branch/Commit ID: 65aedc5e7e1f3ccace7f9022f8a54b3f0d5c9a8c
	mutect parallel workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/mutect.cwl Branch/Commit ID: 35e6b3ef71b4a2a9caba1dbd5dc424a8809bcc0a
	Detect Docm variants	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: 5f120e5bc3c0f75bfbc636ea2c6f4393f5d45ca1
	js-expr-req-wf.cwl#wf	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/js-expr-req-wf.cwl Branch/Commit ID: 691dea280b40ac177b4a38b33375139ca0ce7e81 Packed ID: wf
	Bisulfite alignment and QC	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: bed420556091b7b8b45cf20a95e5947e1de9a416
	downsample unaligned BAM and align	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: 5f120e5bc3c0f75bfbc636ea2c6f4393f5d45ca1
	pindel parallel workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel.cwl Branch/Commit ID: 5f120e5bc3c0f75bfbc636ea2c6f4393f5d45ca1