Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph revsort.cwl

Reverse the lines in a document, then sort those lines.

 https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/revsort.cwl

Branch/Commit ID: 551d58d409ef2a0fa2e3ab93b85167dd7d4b1833
workflow graph amplicon-2.cwl

https://github.com/EBI-Metagenomics/pipeline-v5.git

Path: workflows/conditionals/amplicon/amplicon-2.cwl

Branch/Commit ID: fff6fa392370b56e1fe7c374167ba73df3018775
workflow graph sec-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/sec-wf.cwl

Branch/Commit ID: 60dfe96952119f472a57524c19ed214e831b21a4
workflow graph exome alignment and tumor-only variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/exome.cwl

Branch/Commit ID: 1560e7817fdb71d58aca7f98aba68809d840ade1
workflow graph timelimit4-wf.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/timelimit4-wf.cwl

Branch/Commit ID: 551d58d409ef2a0fa2e3ab93b85167dd7d4b1833
workflow graph mpi_simple_wf.cwl

Simple 2 step workflow to check that workflow steps are independently picking up on the number of processes. First run the parallel get PIDs step (on the input num procs) then run (on a single proc) the line count. This should equal the input.

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/mpi_simple_wf.cwl

Branch/Commit ID: 07ebbea2bdf97955060c1dd563580b386388519b
workflow graph cond-wf-007_nojs.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/conditionals/cond-wf-007_nojs.cwl

Branch/Commit ID: 551d58d409ef2a0fa2e3ab93b85167dd7d4b1833
workflow graph Produce a list of residue-mapped structural domain instances from Pfam ids

Retrieve and process the PDB structures corresponding to the Pfam family ids resulting in a list of residue-mapped structural domain instances along with lost structural instances (requires Data/pdbmap downloaded from Pfam and uses SIFTS resource for UniProt to PDB residue Mapping)

https://github.com/HrishiDhondge/CroMaSt.git

Path: Tools/resmapping_pfam_instances_subwf.cwl

Branch/Commit ID: 47a0b8969fb885ed3754c4f06d3045cd0312dd3a
workflow graph revcomp_with_rename.cwl

https://github.com/puentesdiaz/workflows.git

Path: workflows/sanbi_cwltutorial/revcomp/revcomp_with_rename.cwl

Branch/Commit ID: master
workflow graph dynresreq-workflow.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/dynresreq-workflow.cwl

Branch/Commit ID: 551d58d409ef2a0fa2e3ab93b85167dd7d4b1833