Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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bam to trimmed fastqs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq.cwl Branch/Commit ID: 6b365b79675b2aabfb8d5829bb8df0a6e986b037 |
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align_sort_sa
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https://github.com/ncbi/pgap.git
Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: 90a321ecf2d049330bcf0657cc4d764d2c3f42dd |
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count-lines11-extra-step-wf-noET.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/count-lines11-extra-step-wf-noET.cwl Branch/Commit ID: 0e37d46e793e72b7c16b5ec03e22cb3ce1f55ba3 |
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umi per-lane alignment subworkflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: 18600518ce6539a2e29c1707392a4c5da5687fa3 |
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bact_get_kmer_reference
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https://github.com/ncbi/pgap.git
Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 609aead9804a8f31fa9b3dbc7e52105aec487f31 |
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bact_get_kmer_reference
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https://github.com/ncbi/pgap.git
Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 4def84df33963fc9ac9d5c5f804b911d01a0d9ad |
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tt_hmmsearch_wnode.cwl
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https://github.com/ncbi/pgap.git
Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: 92118627c800e4addb7e29b9dabcca073a5bae71 |
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EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: workflows/emg-qc-paired.cwl Branch/Commit ID: f993cada89d2c6f7480a0d56baa7836a361b1f3a |
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Vcf concordance evaluation workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/vcf_eval_concordance.cwl Branch/Commit ID: 25eab0390f6866ce491b44c89d9e0435d228ab6f |
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kmer_cache_store
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: 92118627c800e4addb7e29b9dabcca073a5bae71 |
