Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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spatial transcriptomics pipeline including analysis with scanpy and squidpy
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https://github.com/hubmapconsortium/xenium-pipeline.git
Path: pipeline.cwl Branch/Commit ID: 3a861e0dda09983a89e7ab48ab57c16d07e75dbe |
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cache_test_workflow.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/cache_test_workflow.cwl Branch/Commit ID: 22bc7d80dd524767b7d7d115747556ac62c27e9f |
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wgs alignment and tumor-only variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/tumor_only_wgs.cwl Branch/Commit ID: 39ac49f5d080bbb6bfa97246f46a5b621254f622 |
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Exome QC workflow
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https://github.com/markrobbo/workflows.git
Path: workflows/hello/exome_alignment_packed.cwl Branch/Commit ID: master Packed ID: workflow_exome.cwl |
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tt_fscr_calls_pass1
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https://github.com/ncbi/pgap.git
Path: task_types/tt_fscr_calls_pass1.cwl Branch/Commit ID: 4b8d11048f1047140b337a2cac6503d80a22d683 |
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trnascan_wnode and gpx_qdump combined
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https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_scan_and_dump.cwl Branch/Commit ID: 681555881cbdf95a1f4c29f6dc272eb6ca8e4d60 |
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packed_no_main.cwl#collision
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/packed_no_main.cwl Branch/Commit ID: 8b0cacc5510eb3eed4e6d6db4bb844cc6114b1dc Packed ID: collision |
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spatial transcriptomics pipeline including analysis with scanpy and squidpy
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https://github.com/hubmapconsortium/xenium-pipeline.git
Path: pipeline.cwl Branch/Commit ID: 3a861e0 |
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gsnap_index.cwl
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https://github.com/CompEpigen/PipelineOlympics.git
Path: CWL/workflows/GSNAP/tools/gsnap_index.cwl Branch/Commit ID: main |
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ValidateCameraGeometry
Validate camera shape, orientation, and pixel positions |
https://github.com/gammasim/workflows.git
Path: workflows/ValidateCameraGeometry.cwl Branch/Commit ID: main |
