Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	kfdrc_process_bam.cwl	https://github.com/kids-first/kf-alignment-workflow.git Path: subworkflows/kfdrc_process_bam.cwl Branch/Commit ID: f656d2d32200bee9d3b001af03d5c8b3d5fcb3a7
	md5-validate.cwl	https://github.com/mr-c/4dn-dcic-pipelines-cwl.git Path: cwl_awsem_v1/md5-validate.cwl Branch/Commit ID: 895a101d06c26f8c7f8a63545b2b74921b5f7526
	FASTQ to BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/fastq_to_bqsr.cwl Branch/Commit ID: 04d21c33a5f2950e86db285fa0a32a6659198d8a
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: 233f026ffce240071edda526391be0c03186fce8
	count-lines5-wf.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/count-lines5-wf.cwl Branch/Commit ID: e67f19d8a713759d761ecad050966d1eb043b85c
	pindel parallel workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel.cwl Branch/Commit ID: 00df82a529a58d362158110581e1daa28b4d7ecb
	align_merge_sas	https://github.com/ncbi/pgap.git Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: 3384fa5776c183d33bef830696b6edc6ec55a292
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: 00df82a529a58d362158110581e1daa28b4d7ecb
	Detect DoCM variants	https://github.com/fgomez02/analysis-workflows.git Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 9c9e6a6a48eb321804ce772a2c2c12b4f2f32529
	count-lines10-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines10-wf.cwl Branch/Commit ID: a70a83fe14a100cd16e2402ec17b2904f5eeb17d