Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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nestedworkflows.cwl
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![]() Path: _includes/cwl/22-nested-workflows/nestedworkflows.cwl Branch/Commit ID: 6835307ad152fe6f84ce1302f1d5314893625dc8 |
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Unaligned BAM to BQSR and VCF
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![]() Path: definitions/subworkflows/bam_to_bqsr_no_dup_marking.cwl Branch/Commit ID: 449bc7e45bb02316d040f73838ef18359e770268 |
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extract_gencoll_ids
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![]() Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 4e2a295bb6c8b4982402ee80538a0cdb8ee6b6dd |
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scatterfail.cwl
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![]() Path: tests/wf/scatterfail.cwl Branch/Commit ID: 07ebbea2bdf97955060c1dd563580b386388519b |
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STAR-Alignment-PE
This workflow aligns the fastq files using STAR for paired-end samples |
![]() Path: workflows/Alignments/star-alignment.cwl Branch/Commit ID: b8f18a03ffbd7d5b78a7f220686b81d539686e98 |
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tt_kmer_top_n.cwl
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![]() Path: task_types/tt_kmer_top_n.cwl Branch/Commit ID: 1b9094d70f620bb2e51072dd2150150aa4927439 |
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workflow.cwl
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![]() Path: cwl/torso/workflow.cwl Branch/Commit ID: 45a329e8a239cd7402cf1be0acebf5ceadb22977 |
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Exome QC workflow
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![]() Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl Branch/Commit ID: 7638b3075863ae8172f4adaec82fb2eb8e80d3d5 |
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Detect Variants workflow for WGS pipeline
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![]() Path: definitions/pipelines/detect_variants_wgs.cwl Branch/Commit ID: 7638b3075863ae8172f4adaec82fb2eb8e80d3d5 |
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main-giab-joint.cwl
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![]() Path: giab-joint/giab-joint-workflow/main-giab-joint.cwl Branch/Commit ID: af9a5621efcb44c249697d6df071fe4defe389ac |