Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph cnv_codex

CNV CODEX calling

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/cnv_codex.cwl

Branch/Commit ID: 1.0.5
workflow graph Detect Docm variants

https://github.com/litd/analysis-workflows.git

Path: definitions/subworkflows/docm_cle.cwl

Branch/Commit ID: master
workflow graph aggregate_visualize

https://github.com/msk-access/qc_generation.git

Path: access_qc__packed.cwl

Branch/Commit ID: develop

Packed ID: aggregate_visualize.cwl
workflow graph EMG assembly for paired end Illumina

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v4-assembly-metaSPAdes.cwl

Branch/Commit ID: master
workflow graph BAT_calling_latest.cwl

https://github.com/CompEpigen/PipelineOlympics.git

Path: CWL/workflows/BAT/tools/BAT_calling_latest.cwl

Branch/Commit ID: main
workflow graph cond-wf-003.1_nojs.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/conditionals/cond-wf-003.1_nojs.cwl

Branch/Commit ID: main
workflow graph bam2fasta.cwl

https://github.com/arvados/bh20-seq-resource.git

Path: workflows/fastq2fasta/bam2fasta.cwl

Branch/Commit ID: master
workflow graph EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/emg-qc-paired.cwl

Branch/Commit ID: master
workflow graph exome alignment and tumor-only variant detection

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/pipelines/tumor_only_exome.cwl

Branch/Commit ID: low-vaf
workflow graph birds.cwl

https://github.com/eosc-lofar/presto-cwl.git

Path: birds.cwl

Branch/Commit ID: visualise