Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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01-qc-se.cwl
ChIP-seq 01 QC - reads: SE |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/ChIP-seq_pipeline/01-qc-se.cwl Branch/Commit ID: 487af88ef0b971f76ecd1a215639bb47e3ee94e1 |
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Apply filters to VCF file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/germline_filter_vcf.cwl Branch/Commit ID: 7638b3075863ae8172f4adaec82fb2eb8e80d3d5 |
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spurious_annot
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https://github.com/ncbi/pgap.git
Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: e2a6cbcc36212433d8fbc804919442787a5e2a49 |
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Detect Docm variants
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: b9e7392e72506cadd898a6ac4db330baf6535ab6 |
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Raw sequence data to BQSR
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_to_bqsr.cwl Branch/Commit ID: 7638b3075863ae8172f4adaec82fb2eb8e80d3d5 |
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pipeline.cwl
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https://github.com/hubmapconsortium/ome-tiff-pyramid.git
Path: pipeline.cwl Branch/Commit ID: b1b40c45741a60e643312ab5513086dbb8105e9a |
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kfdrc_cram_reheader_wf.cwl
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https://github.com/kids-first/kf-alignment-workflow.git
Path: workflows/kfdrc_cram_reheader_wf.cwl Branch/Commit ID: a25fbec152d701623a7a8fa494b1179cc3c39c38 |
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02-trim-se.cwl
ATAC-seq 02 trimming - reads: SE |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/02-trim-se.cwl Branch/Commit ID: 487af88ef0b971f76ecd1a215639bb47e3ee94e1 |
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amplicon_preprocess_workflow.cwl
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https://github.com/kmooog/amplicon-pipeline.git
Path: script/1-preproccess/amplicon_preprocess_workflow.cwl Branch/Commit ID: eccef9b8e80e1a8729e7bd54f06f895a847b024d |
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Apply filters to VCF file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: ece70ac30cd87100a70f7dc64d08fa72724e9416 |
