Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	scatter-wf3.cwl#main	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-wf3.cwl Branch/Commit ID: 691dea280b40ac177b4a38b33375139ca0ce7e81 Packed ID: main
	downsample unaligned BAM and align	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: 3bb0693076adc1543079a6b136c74906ad546ac6
	align_merge_sas	https://github.com/ncbi/pgap.git Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: f5d70f3ad365a2c017fab1c9654c88bc1caf41aa
	umi molecular alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/molecular_qc.cwl Branch/Commit ID: c625e05eefb1754353c1bdfa46c01dc61e6233dd
	Detect Variants workflow for WGS pipeline	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/detect_variants_wgs.cwl Branch/Commit ID: 9e5f228bc1a3d0dfe950b5d41d7e4319e834a6d4
	conflict.cwl#main	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/conflict.cwl Branch/Commit ID: d7cd45f7072960d264962ecc5a04d7c219f65c06 Packed ID: main
	assemble.cwl Assemble a set of reads using SKESA	https://github.com/ncbi/pgap.git Path: assemble.cwl Branch/Commit ID: 4f4448f71645275db5b84eb551990dfe3bf37cbb
	wgs alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_wgs.cwl Branch/Commit ID: e8b7759826df40b8bb821b40b15aea960a4951c4
	rRNA_selection.cwl	https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git Path: tools/rRNA_selection.cwl Branch/Commit ID: 3f85843d4a6debdabe96bc800bf2a4efdcda1ef3
	Apply filters to VCF file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: cfdcd0735e8fb1ac0b97f1a5cbe0cc7e00033dd0