Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
bact_get_kmer_reference
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: f5d70f3ad365a2c017fab1c9654c88bc1caf41aa |
|
|
|
Subworkflow that runs cnvkit in single sample mode and returns a vcf file
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: c625e05eefb1754353c1bdfa46c01dc61e6233dd |
|
|
|
search.cwl#main
|
https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/search.cwl Branch/Commit ID: ca8e6661b5cab1f017e5bc4024650722dae4d50b Packed ID: main |
|
|
|
adapter for sequence_align_and_tag
Some workflow engines won't stage files in our nested structure, so parse it out here |
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_align_and_tag_adapter.cwl Branch/Commit ID: 389f6edccab082d947bee9c032f59dbdf9f7c325 |
|
|
|
kfdrc_process_se_readslist2.cwl
|
https://github.com/inab/kf-alignment-workflow.git
Path: subworkflows/kfdrc_process_se_readslist2.cwl Branch/Commit ID: 425c6561b6c52139190666b761cb0350cfd8ad9c |
|
|
|
kfdrc_bam_to_gvcf.cwl
|
https://github.com/inab/kf-alignment-workflow.git
Path: subworkflows/kfdrc_bam_to_gvcf.cwl Branch/Commit ID: 425c6561b6c52139190666b761cb0350cfd8ad9c |
|
|
|
kfdrc_process_bamlist.cwl
|
https://github.com/inab/kf-alignment-workflow.git
Path: subworkflows/kfdrc_process_bamlist.cwl Branch/Commit ID: 425c6561b6c52139190666b761cb0350cfd8ad9c |
|
|
|
fp_filter workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: 046e980d131ebaf71f76599a749e2294c40c9d0d |
|
|
|
kfdrc_process_pe_readslist2.cwl
|
https://github.com/inab/kf-alignment-workflow.git
Path: subworkflows/kfdrc_process_pe_readslist2.cwl Branch/Commit ID: 425c6561b6c52139190666b761cb0350cfd8ad9c |
|
|
|
process VCF workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_process_vcf.cwl Branch/Commit ID: 046e980d131ebaf71f76599a749e2294c40c9d0d |
