Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Run pindel on provided region	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: 509938802c5e42bb8084c6a5a26ab6425c60e69a
	umi molecular alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/molecular_alignment.cwl Branch/Commit ID: f0cdc773e31e4aa116838e8aba4954c31bd3d68b
	kmer_top_n	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_kmer_top_n.cwl Branch/Commit ID: bf7e02ee89d1bb18462cefdbe0db41b09fe75236
	FASTQ to BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/fastq_to_bqsr.cwl Branch/Commit ID: 3034168d652bfa930ba09af20e473a4564a8010d
	Unaligned BAM to BQSR and VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_bqsr_no_dup_marking.cwl Branch/Commit ID: 74647cc0f1abac4ee22950cfa89c44cf2ca3cffd
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: 0b6e8fd8ead7644cf5398395b76af5cf4011686f
	step-valuefrom-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/step-valuefrom-wf.cwl Branch/Commit ID: 9a8e654a91ea5d26e8452dd1cecf3faf22b7a12e
	Unaligned BAM to BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: 9e5f228bc1a3d0dfe950b5d41d7e4319e834a6d4
	iwdr_with_nested_dirs.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/iwdr_with_nested_dirs.cwl Branch/Commit ID: 9a8e654a91ea5d26e8452dd1cecf3faf22b7a12e
	WGS QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_wgs.cwl Branch/Commit ID: 68eda647259849ca81ac0bb07a24bc8a4465a630