Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Apply filters to VCF file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/germline_filter_vcf.cwl Branch/Commit ID: 2e0562a5c3cd7aac24af4c622a5ae68a7fb23a71
	Unaligned BAM to BQSR and VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_bqsr_no_dup_marking.cwl Branch/Commit ID: 87faba2fff8007ecc95160729b1c7cd0376e46f2
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: 480c438a6a7e78c624712aec01bc4214d2bc179c
	format_rrnas_from_seq_entry	https://github.com/ncbi/pgap.git Path: task_types/tt_format_rrnas_from_seq_entry.cwl Branch/Commit ID: f2bd4687f06f85ea848b6f1ce04ec97f48525334
	Compute library complexity This workflow compute library complexity	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/File-formats/bedtools-bam-pbc.cwl Branch/Commit ID: e541470bc9d0b064bc4ed7dd2b45d8ec67760613
	gcaccess_from_list	https://github.com/ncbi/pgap.git Path: task_types/tt_gcaccess_from_list.cwl Branch/Commit ID: 7c8eb4d23c3c9859f57421643710c0b6d57b606c
	Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 77ec4f26eb14ed82481828bd9f6ef659cfd8b40f
	AltAnalyze ICGS AltAnalyze ICGS ===============	https://github.com/datirium/workflows.git Path: workflows/altanalyze-icgs.cwl Branch/Commit ID: b1a5dabeeeb9079b30b2871edd9c9034a1e00c1c
	kfdrc_alignment_wf.cwl	https://github.com/kids-first/kf-alignment-workflow.git Path: workflows/kfdrc_alignment_wf.cwl Branch/Commit ID: fc947e792856747f8dbd78811ee105dbd736bea6
	format_rrnas_from_seq_entry	https://github.com/ncbi/pgap.git Path: task_types/tt_format_rrnas_from_seq_entry.cwl Branch/Commit ID: 953d7866bc70e14c02a6bb8c5a72305caa823bfc