Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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RNA-Seq alignment and transcript/gene abundance workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/rnaseq.cwl Branch/Commit ID: 844c10a4466ab39c02e5bfa7a210c195b8efa77a |
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Bisulfite alignment and QC
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https://github.com/fgomez02/analysis-workflows.git
Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: 9c9e6a6a48eb321804ce772a2c2c12b4f2f32529 |
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Nested workflow example
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/nested.cwl Branch/Commit ID: 4700fbee9a5a3271eef8bc9ee595619d0720431b |
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alignment_workflow.cwl
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https://github.com/uc-cdis/topmed-cwl.git
Path: aligner/functional-equivalence/workflow/alignment_workflow.cwl Branch/Commit ID: 4cc5032655bc5041d5be13541c55e30dccc63499 |
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Detect Variants workflow
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/pipelines/detect_variants_mouse.cwl Branch/Commit ID: 233f026ffce240071edda526391be0c03186fce8 |
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workflow_vs.cwl
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https://github.com/sapojnik/av_screen_x.git
Path: progs/workflow_vs.cwl Branch/Commit ID: 2f464b439b914c05b2a3e3b2f9fcab3657f33ca2 |
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Unaligned BAM to BQSR and VCF
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/subworkflows/bam_to_bqsr_no_dup_marking.cwl Branch/Commit ID: 233f026ffce240071edda526391be0c03186fce8 |
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kmer_cache_store
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: 7cee09fb3e33c851e4e1dfc965c558b82290a785 |
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vecscreen_and_filter_workflow.cwl
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https://github.com/sapojnik/av_screen_x.git
Path: progs/vecscreen_and_filter_workflow.cwl Branch/Commit ID: 2f464b439b914c05b2a3e3b2f9fcab3657f33ca2 |
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sec-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/sec-wf.cwl Branch/Commit ID: 4700fbee9a5a3271eef8bc9ee595619d0720431b |
