Explore Workflows
View already parsed workflows here or click here to add your own
Showing results for "rnaseq" (Show all)
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: ec5355f335852e51c6938809c16ea1d230a3f983 |
|
|
|
rnaseq-header.cwl
|
https://github.com/datirium/workflows.git
Path: metadata/rnaseq-header.cwl Branch/Commit ID: 91bb63948c0a264334b9007ef85f936768d90d11 |
|
|
|
rnaseq-se.cwl
Runs RNA-Seq BioWardrobe basic analysis with single-end data file. |
https://github.com/Barski-lab/workflows.git
Path: workflows/rnaseq-se.cwl Branch/Commit ID: e706ffe742cfdf713c4315ab2fb56d07f7e688cb |
|
|
|
rnaseq-header.cwl
|
https://github.com/datirium/workflows.git
Path: metadata/rnaseq-header.cwl Branch/Commit ID: 282762f8bbaea57dd488115745ef798e128bade1 |
|
|
|
rnaseq-alignment-quantification
This workflow retrieve SRA fastqc data and execute QC, alignment and quantification from TPMCalculator |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/RNA-Seq/rnaseq-alignment-quantification.cwl Branch/Commit ID: 1b1cb5bbbe53a2dd5d7de7cdbff19c1bdbe23a49 |
|
|
|
rnaseq-pe.cwl
Runs RNA-Seq BioWardrobe basic analysis with pair-end data file. |
https://github.com/Barski-lab/workflows.git
Path: workflows/rnaseq-pe.cwl Branch/Commit ID: 801f7b363e0599b9a28ecda696dfdb1c0e40ce71 |
|
|
|
rnaseq-header.cwl
|
https://github.com/datirium/workflows.git
Path: metadata/rnaseq-header.cwl Branch/Commit ID: b12cb5fd76180ced61e9e22ace1a42fade265bae |
|
|
|
rnaseq-pe-dutp-mitochondrial.cwl
RNA-Seq strand specific mitochondrial workflow for pair-end experiment based on BioWardrobe's basic analysis. |
https://github.com/datirium/workflows.git
Path: workflows/rnaseq-pe-dutp-mitochondrial.cwl Branch/Commit ID: e284e3f6dff25037b209895c52f2abd37a1ce1bf |
|
|
|
rnaseq-pe-dutp.cwl
RNA-Seq basic analysis workflow for strand specific paired-end experiment. |
https://github.com/datirium/workflows.git
Path: workflows/rnaseq-pe-dutp.cwl Branch/Commit ID: 94471ee6c01b7bc17102e45e56e7366c2a52acdf |
|
|
|
rnaseq-header.cwl
|
https://github.com/datirium/workflows.git
Path: metadata/rnaseq-header.cwl Branch/Commit ID: 78955730b492047429e00d0a0620d37efb6dbbfe |
