Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	unifiedgenotyper.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/cwl/workflows/variant_calling/unifiedgenotyper.cwl Branch/Commit ID: 28bb82ba031041321ff9caa5c299ec1bb15d7471
	harmonization_novoalign.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/cwl/workflows/harmonization/harmonization_novoalign.cwl Branch/Commit ID: 28bb82ba031041321ff9caa5c299ec1bb15d7471
	Unaligned to aligned BAM	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align.cwl Branch/Commit ID: c625e05eefb1754353c1bdfa46c01dc61e6233dd
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 4b5970dcf08bac2598e62ffd2673e67a25004c40
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: 9e5f228bc1a3d0dfe950b5d41d7e4319e834a6d4
	gp_makeblastdb	https://github.com/ncbi/pgap.git Path: progs/gp_makeblastdb.cwl Branch/Commit ID: aa64bf6a90e0780ab564de865dbb027df98c0a01
	02-trim-se.cwl RNA-seq 02 trimming - reads: SE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/RNA-seq_pipeline/02-trim-se.cwl Branch/Commit ID: 4e568335133405d28f4b73ae11e7f51f2900dfa3
	tt_univec_wnode.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_univec_wnode.cwl Branch/Commit ID: aa64bf6a90e0780ab564de865dbb027df98c0a01
	wffail.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/wffail.cwl Branch/Commit ID: a94d75178c24ce77b59403fb8276af9ad1998929
	vecscreen.cwl	https://github.com/ncbi/pgap.git Path: vecscreen/vecscreen.cwl Branch/Commit ID: 2d54b11cc9891c9aa52515fe4f8cd9cba12c6629