Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
count-lines4-wf.cwl
|
https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines4-wf.cwl Branch/Commit ID: 819c81af5449ec912bbbbead042ad66b8d3fd8d4 |
|
|
|
collate_unique_SSU_headers.cwl
|
https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: f993cada89d2c6f7480a0d56baa7836a361b1f3a |
|
|
|
fastq2fasta-create-bwaindex.cwl
|
https://github.com/hpobio-lab/viral-analysis.git
Path: cwl/fastq2fasta/fastq2fasta-create-bwaindex.cwl Branch/Commit ID: 24465ba219711f2828e633d25d9f183e0f0eaccd |
|
|
|
wgs alignment with qc
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/alignment_wgs.cwl Branch/Commit ID: 2ae0a374fab650757cdae4391c8cbd32f02edf97 |
|
|
|
count-lines5-wf.cwl
|
https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines5-wf.cwl Branch/Commit ID: d7481d03fa4b5b4630392540f598acfb100b421d |
|
|
|
1st-workflow.cwl
|
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/1st-workflow.cwl Branch/Commit ID: e4a52682f3bdefafe5c27e32983fed31116ac489 |
|
|
|
umi molecular alignment workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/molecular_alignment.cwl Branch/Commit ID: 3a287b7cb6162cdea79865235d224fea45963d87 |
|
|
|
tRNA_selection.cwl
|
https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: f993cada89d2c6f7480a0d56baa7836a361b1f3a |
|
|
|
sec-wf.cwl
|
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/sec-wf.cwl Branch/Commit ID: a94d75178c24ce77b59403fb8276af9ad1998929 |
|
|
|
Cut-n-Run pipeline paired-end
Experimental pipeline for Cut-n-Run analysis. Uses mapping results from the following experiment types: - `chipseq-pe.cwl` - `trim-chipseq-pe.cwl` - `trim-atacseq-pe.cwl` Note, the upstream analyses should not have duplicates removed |
https://github.com/datirium/workflows.git
Path: workflows/trim-chipseq-pe-cut-n-run.cwl Branch/Commit ID: 8bf36bfad5624fbc8fc315e82783a44e9e5e4470 |
