Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph trim-chipseq-se.cwl

Runs ChIP-Seq BioWardrobe basic analysis with single-end data file.

https://github.com/Barski-lab/workflows.git

Path: workflows/trim-chipseq-se.cwl

Branch/Commit ID: master

workflow graph GATK-Sub-Workflow-h3abionet-indel-no-vqsr.cwl

https://github.com/common-workflow-language/workflows.git

Path: workflows/GATK/GATK-Sub-Workflow-h3abionet-indel-no-vqsr.cwl

Branch/Commit ID: h3abionet-gatk-workflow

workflow graph SetParameterWorkflowMissing

This is a placeholder for a missing setting workflow.

https://github.com/gammasim/workflows.git

Path: workflows/SetParameterWorkflowMissing.cwl

Branch/Commit ID: main

workflow graph TAP 0.9

todo

https://github.com/MG-RAST/amplicon.git

Path: CWL/Workflows/relabel-and-merge.cwl

Branch/Commit ID: master

workflow graph kallisto-demo.cwl

https://github.com/common-workflow-language/workflows.git

Path: workflows/kallisto-demo.cwl

Branch/Commit ID: master

workflow graph compile1.cwl#main

https://github.com/common-workflow-language/workflows.git

Path: workflows/compile/compile1.cwl

Branch/Commit ID: feature/feature-GATK-Yassine

Packed ID: main

workflow graph Salmon quantification, FASTQ -> H5AD count matrix

https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git

Path: salmon-rnaseq/steps/salmon-quantification.cwl

Branch/Commit ID: a33bc8a

workflow graph func_ann_and_post_proccessing-subwf.cwl

https://github.com/EBI-Metagenomics/pipeline-v5.git

Path: workflows/subworkflows/raw_reads/func_ann_and_post_proccessing-subwf.cwl

Branch/Commit ID: master

workflow graph sec-wf-out.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/sec-wf-out.cwl

Branch/Commit ID: ca7f7687b39611c295dc9d21c542214f2b462093

workflow graph cram_to_bam workflow

https://github.com/markrobbo/workflows.git

Path: workflows/hello/exome_alignment_packed.cwl

Branch/Commit ID: master

Packed ID: workflow.cwl