Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: 9161ef43f7bf0e22b365fde9ec92edcb8601798e
	bacterial_kmer	https://github.com/ncbi/pgap.git Path: bacterial_kmer/wf_bacterial_kmer.cwl Branch/Commit ID: 7c8eb4d23c3c9859f57421643710c0b6d57b606c
	03-map-pe.cwl ChIP-seq 03 mapping - reads: PE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/ChIP-seq_pipeline/03-map-pe.cwl Branch/Commit ID: 4e568335133405d28f4b73ae11e7f51f2900dfa3
	trim_and_map.cwl	https://github.com/CompEpigen/ATACseq_workflows.git Path: CWL/workflow_modules/trim_and_map.cwl Branch/Commit ID: da07ef9c506ba921438df0bc9f6e1ee57b7d5910
	Exome QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl Branch/Commit ID: 3a287b7cb6162cdea79865235d224fea45963d87
	STAR-Alignment-PE This workflow aligns the fastq files using STAR for paired-end samples	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/Alignments/star-alignment.cwl Branch/Commit ID: 265440c63ab75d2451c90bcd116e725626e9a608
	genomics-workspace-cds.cwl	https://github.com/nal-i5k/organism_onboarding.git Path: flow_genomicsWorkspace/genomics-workspace-cds.cwl Branch/Commit ID: 45bb8fc5cc5e5fee3f29099469621a53d084757d
	workflow.cwl	https://github.com/NAL-i5K/Organism_Onboarding.git Path: flow_dispatch/workflow.cwl Branch/Commit ID: 39b1d1a39a2ccdadd52db15b41422ecccc66e605
	Merge, annotate, and generate a TSV for SVs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: c625e05eefb1754353c1bdfa46c01dc61e6233dd
	count-lines1-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines1-wf.cwl Branch/Commit ID: d7481d03fa4b5b4630392540f598acfb100b421d