Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	tt_kmer_compare_wnode Pairwise comparison	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_compare_wnode.cwl Branch/Commit ID: 5331b0836aa7c451d759ef39dc2062000ac21a47
	extract_gencoll_ids	https://github.com/ncbi/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 77a9fa25b89ce73582a1ce6ba75fa6d2537fb8e8
	Running cellranger count and lineage inference	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_cell_rnaseq.cwl Branch/Commit ID: adcae308fdccaa1190083616118dfadb4df65dca
	kmer_cache_retrieve	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: 5331b0836aa7c451d759ef39dc2062000ac21a47
	umi molecular alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/molecular_alignment.cwl Branch/Commit ID: 457e101e3fb87e7fd792357afce00ed8ccbfbcdb
	secret_wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/secret_wf.cwl Branch/Commit ID: 4700fbee9a5a3271eef8bc9ee595619d0720431b
	format_rrnas_from_seq_entry	https://github.com/ncbi/pgap.git Path: task_types/tt_format_rrnas_from_seq_entry.cwl Branch/Commit ID: 42712bca4c3307d87b6b55f525a4c97cb6f7e288
	FASTQ to BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/fastq_to_bqsr.cwl Branch/Commit ID: 8eb189a4a34dc8cd86380685f814c79a444a7601
	umi duplex alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: 77ec4f26eb14ed82481828bd9f6ef659cfd8b40f
	bam to trimmed fastqs	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/subworkflows/bam_to_trimmed_fastq.cwl Branch/Commit ID: 233f026ffce240071edda526391be0c03186fce8