Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Cell Ranger Aggregate Cell Ranger Aggregate =====================	https://github.com/datirium/workflows.git Path: workflows/cellranger-aggr.cwl Branch/Commit ID: b1a5dabeeeb9079b30b2871edd9c9034a1e00c1c
	extract_gencoll_ids	https://github.com/ncbi/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 92118627c800e4addb7e29b9dabcca073a5bae71
	Gathered Downsample and HaplotypeCaller	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/gathered_downsample_and_recall.cwl Branch/Commit ID: 889a077a20c0fdb01f4ed97aa4bc40f920c37a1a
	bact_get_kmer_reference	https://github.com/ncbi/pgap.git Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 9144d08fa7f4e852498761481dceab477167fa65
	workflow.cwl	https://github.com/nal-i5k/organism_onboarding.git Path: flow_dispatch/workflow.cwl Branch/Commit ID: b1e1b906fcfb2c0fad8811fb8ab03009282c1d19
	kmer_seq_entry_extract_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_seq_entry_extract_wnode.cwl Branch/Commit ID: 4def84df33963fc9ac9d5c5f804b911d01a0d9ad
	Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass4.cwl Branch/Commit ID: 5463361069e263ad6455858e054c1337b1d9e752
	exome alignment with qc, no bqsr, no verify_bam_id	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_exome_nonhuman.cwl Branch/Commit ID: 35e6b3ef71b4a2a9caba1dbd5dc424a8809bcc0a
	pulsar_timing_prototype_workflow.cwl	https://github.com/tmcantwell/pulsar_timing_prototype.git Path: pulsar_timing_prototype_workflow.cwl Branch/Commit ID: cfbb07cf9d214fff636c305675530748e94b359a
	align_sort_sa	https://github.com/ncbi/pgap.git Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: 4e2a295bb6c8b4982402ee80538a0cdb8ee6b6dd