Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	gather AML trio outputs	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/aml_trio_cle_gathered.cwl Branch/Commit ID: 77ec4f26eb14ed82481828bd9f6ef659cfd8b40f
	scatter-wf1.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-wf1.cwl Branch/Commit ID: d7cd45f7072960d264962ecc5a04d7c219f65c06
	Single-Cell Preprocessing Cell Ranger Pipeline Devel version of Single-Cell Preprocessing Cell Ranger Pipeline ===============================================================	https://github.com/datirium/workflows.git Path: workflows/single-cell-preprocess-cellranger.cwl Branch/Commit ID: 4a5c59829ff8b9f3c843e66e3c675dcd9c689ed5
	gcaccess_from_list	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_gcaccess_from_list.cwl Branch/Commit ID: 97330968839983824a11ac32dff981d8ecb00955
	bact_get_kmer_reference	https://github.com/ncbi/pgap.git Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: f1eb0f4eaaf1661044f28d859f7e8d4302525ead
	pipeline-se.cwl DNase-seq pipeline - reads: SE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/DNase-seq_pipeline/pipeline-se.cwl Branch/Commit ID: 517487e59d240c197fc91f08d20dadca97a9e121
	js_output_workflow.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/js_output_workflow.cwl Branch/Commit ID: 5bdb3d3dd47d8d1b3a1685220b4b6ce0f94c055e
	sec-wf-out.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/sec-wf-out.cwl Branch/Commit ID: 4700fbee9a5a3271eef8bc9ee595619d0720431b
	Unaligned BAM to BQSR and VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_bqsr_no_dup_marking.cwl Branch/Commit ID: f42c889734c8f709ad2fd9090493bcaac8326c98
	extract_gencoll_ids	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 97330968839983824a11ac32dff981d8ecb00955