Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	extract_gencoll_ids	https://github.com/ncbi/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 551493f5c24b757a46cd22821a05e6ac6dcceb7f
	Filter single sample sv vcf from depth callers(cnvkit/cnvnator)	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sv_depth_caller_filter.cwl Branch/Commit ID: 389f6edccab082d947bee9c032f59dbdf9f7c325
	align_merge_sas	https://github.com/ncbi/pgap.git Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: b560e3abadfb150a0013376d7a189df066ab56f9
	extract_gencoll_ids	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: b360e89d85d83ba3b863bf86074c0ec7e5c58f48
	count-lines10-wf.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/count-lines10-wf.cwl Branch/Commit ID: 4fe434e969c93c94b690ba72db295d9d52a6f576
	presto_nosort.cwl	https://github.com/eosc-lofar/presto-cwl.git Path: presto_nosort.cwl Branch/Commit ID: f6661b12c4c28184e826e5e64113e6f04eb8e39c
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 97572e3a088d79f6a4166385f79e79ea77b11470
	Find reads with predicted coding sequences above 60 AA in length	https://github.com/proteinswebteam/ebi-metagenomics-cwl.git Path: workflows/orf_prediction.cwl Branch/Commit ID: ecf044f3a5a7589cb2238487a19f22863c2bcdb1
	align_sort_sa	https://github.com/ncbi/pgap.git Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: b560e3abadfb150a0013376d7a189df066ab56f9
	Unaligned BAM to BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: ecac0fda44df3a8f25ddfbb3e7a023fcbe4cbd0f