Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: 97572e3a088d79f6a4166385f79e79ea77b11470
	kmer_compare_wnode	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_kmer_compare_wnode.cwl Branch/Commit ID: c08fd46e8f715b9b5aa487466705863e4b1829df
	cluster_blastp_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 45d134ce3d436c53637a2d83755e9b4613267e9f
	kmer_cache_retrieve	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: c08fd46e8f715b9b5aa487466705863e4b1829df
	Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 97572e3a088d79f6a4166385f79e79ea77b11470
	umi duplex alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: 3a822294da63b4e19446a285e2fef075e23cf3d0
	tt_univec_wnode.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_univec_wnode.cwl Branch/Commit ID: 3897218b16b30a933beecd60a98a300d677207d8
	default-dir5.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/default-dir5.cwl Branch/Commit ID: 78fe9d41ee5a44f8725dfbd7028e4a5ee42949cf
	align_merge_sas	https://github.com/ncbi/pgap.git Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: 33dcc054a8718edad26440f085d73b7c5d7b7871
	Run pindel on provided region	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: 97572e3a088d79f6a4166385f79e79ea77b11470