Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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prepare_reference.cwl
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https://github.com/kids-first/kf-alignment-workflow.git
Path: subworkflows/prepare_reference.cwl Branch/Commit ID: 09c05e788df9cd77cead39892fd02140faa765a8 |
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Subworkflow to allow calling different SV callers which require bam files as inputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: 3a822294da63b4e19446a285e2fef075e23cf3d0 |
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align_merge_sas
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https://github.com/ncbi/pgap.git
Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: be465ad19b07378f3f863f2c4e0019b420c859f2 |
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kmer_top_n_extract
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_kmer_top_n_extract.cwl Branch/Commit ID: b360e89d85d83ba3b863bf86074c0ec7e5c58f48 |
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taxonomy_check_16S
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https://github.com/ncbi/pgap.git
Path: task_types/tt_taxonomy_check_16S.cwl Branch/Commit ID: b12ec8c8e832151033b9e6c0a76a3c3df18d45da |
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Detect Docm variants
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: 480c438a6a7e78c624712aec01bc4214d2bc179c |
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Unaligned to aligned BAM
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/align.cwl Branch/Commit ID: 3a822294da63b4e19446a285e2fef075e23cf3d0 |
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downsample unaligned BAM and align
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: d3e4bf55753cd92f97537c7d701187ea92d1e5f0 |
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kfdrc_process_se_set.cwl
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https://github.com/inab/kf-alignment-workflow.git
Path: subworkflows/kfdrc_process_se_set.cwl Branch/Commit ID: cbf58e7ccb096f72b9804ea924c5405b29ec87df |
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Bisulfite QC tools
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bisulfite_qc.cwl Branch/Commit ID: d3e4bf55753cd92f97537c7d701187ea92d1e5f0 |
