Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: 041a234a935c7af7d3db95353ef80c61c88fc010
	alignment_bwa_mem.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/cwl/workflows/harmonization/alignment_bwa_mem.cwl Branch/Commit ID: 0f8f97e6173085500b688ca8c601b1ce966dce33
	Hello World Outputs a message using echo	https://github.com/common-workflow-language/workflows.git Path: workflows/hello/hello-param.cwl Branch/Commit ID: 64a85607e719ff6b92e9a0f8c487972715090407
	fastq_clean_pe.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/fastq_clean_pe.cwl Branch/Commit ID: 3cb464a3a5c39cc060cd23d9c60918bc9ffb169b
	chksum_seqval_wf_interleaved_fq.cwl	https://github.com/cancerit/workflow-seq-import.git Path: cwls/chksum_seqval_wf_interleaved_fq.cwl Branch/Commit ID: 6a4058e63319e8753652e6f61588364407a174af
	chksum_seqval_wf_paired_fq.cwl	https://github.com/cancerit/workflow-seq-import.git Path: cwls/chksum_seqval_wf_paired_fq.cwl Branch/Commit ID: 9c430854aef9c173c549e76eccf85c3f0e6b5e65
	chksum_seqval_wf_interleaved_fq.cwl	https://github.com/cancerit/workflow-seq-import.git Path: cwls/chksum_seqval_wf_interleaved_fq.cwl Branch/Commit ID: 9c430854aef9c173c549e76eccf85c3f0e6b5e65
	extract_readgroups_bam_http.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/extract_readgroups_bam_http.cwl Branch/Commit ID: cf2e9d7c3cc87ce97a1fbf73fad574b170fedcfb
	chksum_xam_to_interleaved_fq.cwl	https://github.com/cancerit/workflow-seq-import.git Path: cwls/chksum_xam_to_interleaved_fq.cwl Branch/Commit ID: 9c430854aef9c173c549e76eccf85c3f0e6b5e65
	Varscan Workflow	https://github.com/genome/cancer-genomics-workflow.git Path: varscan/workflow.cwl Branch/Commit ID: d1ee6a2a323cee7e4af00c7e0b926c2192038e1d