Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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bam to trimmed fastqs and HISAT alignments
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: downsample_and_recall |
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wf_paleocar_models.cwl
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https://github.com/idaks/cwl_modeling.git
Path: yw_cwl_modeling/yw2cwl_parser/example_sql/paleocar_models/wf_paleocar_models.cwl Branch/Commit ID: master |
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rRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/rRNA_selection.cwl Branch/Commit ID: 8515542 |
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rhapsody_targeted_1.9-beta.cwl#VDJ_ig.cwl
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https://github.com/longbow0/cwl.git
Path: v1.9-beta/rhapsody_targeted_1.9-beta.cwl Branch/Commit ID: master Packed ID: VDJ_ig.cwl |
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test_workflow.cwl
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https://github.com/jniestroy/cwl_parser.git
Path: workflows/test_workflow.cwl Branch/Commit ID: master |
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wf_clipseqcore_pe_2barcodes.cwl
Workflow for handling reads containing two barcodes. Returns the bam file containing read2 only. Notes: runs the following steps: - demultiplex - trimfirst_file2string - trimagain_file2string - b1_trim_and_map - view_r2 - index_r2_bam - make_bigwigs |
https://github.com/YeoLab/eclip.git
Path: cwl/wf_clipseqcore_pe_2barcodes.cwl Branch/Commit ID: master |
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cond-wf-002_nojs.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/conditionals/cond-wf-002_nojs.cwl Branch/Commit ID: main |
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bqsr-distr.cwl
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https://github.com/Sentieon/Sentieon-cwl.git
Path: stage/bqsr-distr.cwl Branch/Commit ID: master |
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Chunked version of phmmer-v3.2.cwl
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https://github.com/mscheremetjew/workflow-is-cwl.git
Path: workflows/phmmer-v3.2-chunked-wf.cwl Branch/Commit ID: assembly |
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htseq_workflow.cwl
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https://github.com/NCI-GDC/htseq-cwl.git
Path: workflows/subworkflows/htseq_workflow.cwl Branch/Commit ID: master |
