Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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umi molecular alignment workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/molecular_qc.cwl Branch/Commit ID: 700e73aaed6db1ad538dd27b2e1709f436ad3edb |
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workflow.cwl
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https://github.com/imilos/silicofcm-workflows.git
Path: ultrasound-m_mode-parametric/workflow.cwl Branch/Commit ID: 92d00c0d6fd5d462606bbaf0a8a9fc039d3d2c83 |
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bam to trimmed fastqs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq.cwl Branch/Commit ID: 8c4e7372247a7f4ed9ed478ef8ea1d239bc88af0 |
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Bisulfite QC tools
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bisulfite_qc.cwl Branch/Commit ID: ece70ac30cd87100a70f7dc64d08fa72724e9416 |
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cram_to_bam workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cram_to_bam_and_index.cwl Branch/Commit ID: 8c4e7372247a7f4ed9ed478ef8ea1d239bc88af0 |
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Filter single sample sv vcf from paired read callers(Manta/Smoove)
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sv_paired_read_caller_filter.cwl Branch/Commit ID: 4aba7c6591c2f1ebd827a36d325a58738c429bea |
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Running cellranger count and lineage inference
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/single_cell_rnaseq.cwl Branch/Commit ID: 8c4e7372247a7f4ed9ed478ef8ea1d239bc88af0 |
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phase VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/phase_vcf.cwl Branch/Commit ID: ece70ac30cd87100a70f7dc64d08fa72724e9416 |
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Alignment without BQSR
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_to_bqsr_nonhuman.cwl Branch/Commit ID: 8c4e7372247a7f4ed9ed478ef8ea1d239bc88af0 |
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bam to trimmed fastqs and biscuit alignments
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: adcae308fdccaa1190083616118dfadb4df65dca |
