Explore Workflows

PGAP pipeline for external usage, powered via containers

https://github.com/ncbi/pgap.git

Path: wf_common.cwl

Branch/Commit ID: 66b5bc323dcd23e1b2c14bf4783babf0f15ca43b

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/examples/1st-workflow.cwl

Branch/Commit ID: fd6e054510e2bb65eed4069a3a88013d7ecbb99c

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/examples/nestedworkflows.cwl

Branch/Commit ID: 4c905b830371eee45188a53510ba0ee9113fd4c8

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/sum-wf.cwl

Branch/Commit ID: a062055fddcc7d7d9dbc53d28288e3ccb9a800d8

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: flow_md5checksums/workflow.cwl

Branch/Commit ID: 17a0f5681accd35ffb666c91295ad1579a53d0d7

https://github.com/kids-first/kf-alignment-workflow.git

Path: workflows/dev/ultra-opt/workflows/kfdrc_alignment_wf.cwl

Branch/Commit ID: c4771ebcfc43309e9abe4719f1c567c95bf47234

https://github.com/teoloup/cwltools.git

Path: full_workflow_notcompact.cwl

Branch/Commit ID: ffff3e8d2310ff23766ce91ab04c7515518303b5

https://github.com/ncbi/pgap.git

Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl

Branch/Commit ID: 66b5bc323dcd23e1b2c14bf4783babf0f15ca43b

RNA-seq 02 trimming - reads: PE

https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/RNA-seq_pipeline/02-trim-pe.cwl

Branch/Commit ID: 0c7a51100908034e82ac008ac206d94ff8b011cd

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/exome_metrics.cwl

Branch/Commit ID: 17823fcd036d134df803fbf76e23b0bc5eabedfd