Explore Workflows

This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow.

https://github.com/baminou/OxoG-Dockstore-Tools.git

Path: preprocess_vcf.cwl

Branch/Commit ID: 95da3d32ee8787361333b2eea09afb8f9c3392a9

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/dnaseq/status_postgres.cwl

Branch/Commit ID: 3fa737f9162bbfbdbc243a3b1ff7c8e110875eba

https://github.com/ncbi-gpipe/pgap.git

Path: clade_assign/wf_assign_clade.cwl

Branch/Commit ID: 0932e4d778ea981cdc19702eab7fc8d572fe8216

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/site/cwlsite.cwl

Branch/Commit ID: 48bd6c751aceef30614d9e43d91865980035781f

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/readgroup_fastq_se.cwl

Branch/Commit ID: 3fa737f9162bbfbdbc243a3b1ff7c8e110875eba

https://github.com/KBNLresearch/ochre.git

Path: ochre/cwl/vudnc-preprocess.cwl

Branch/Commit ID: 9f33fb8a059b6a75646c82edcd91b6beb645894f

https://github.com/andersgs/cwl_flows.git

Path: limit_detection/limit_detection.cwl

Branch/Commit ID: d0be8f7f06973766c74497f05be7f0150b680610

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines8-wf.cwl

Branch/Commit ID: 48bd6c751aceef30614d9e43d91865980035781f

https://github.com/wtsi-hgi/arvados-pipelines.git

Path: cwl/workflows/seq_cache_workflow.cwl

Branch/Commit ID: 53031601de415a071b7034b28984393db183efa7

https://github.com/KBNLresearch/ochre.git

Path: ochre/cwl/ocrevaluation-performance-test-files-wf-pack.cwl

Branch/Commit ID: 9f33fb8a059b6a75646c82edcd91b6beb645894f

Packed ID: main