Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
Non-Coding Bacterial Genes
|
https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: 7cee09fb3e33c851e4e1dfc965c558b82290a785 |
|
|
|
Run tRNAScan
|
https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: 7cee09fb3e33c851e4e1dfc965c558b82290a785 |
|
|
|
Create Genomic Collection for Bacterial Pipeline, ASN.1 input
|
https://github.com/ncbi/pgap.git
Path: genomic_source/wf_genomic_source_asn.cwl Branch/Commit ID: 7cee09fb3e33c851e4e1dfc965c558b82290a785 |
|
|
|
Unaligned BAM to BQSR and VCF
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_bqsr_no_dup_marking.cwl Branch/Commit ID: fa0bf2a51b72cd0869253943b67aa8e271633945 |
|
|
|
spurious_annot pass2
|
https://github.com/ncbi/pgap.git
Path: spurious_annot/wf_spurious_annot_pass2.cwl Branch/Commit ID: 7cee09fb3e33c851e4e1dfc965c558b82290a785 |
|
|
|
Get Proteins
|
https://github.com/ncbi/pgap.git
Path: wf_bacterial_prot_src.cwl Branch/Commit ID: 7cee09fb3e33c851e4e1dfc965c558b82290a785 |
|
|
|
kmer_seq_entry_extract_wnode
|
https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_kmer_seq_entry_extract_wnode.cwl Branch/Commit ID: a539d600357a48a558daf43fc41a89aae79f9e86 |
|
|
|
tt_hmmsearch_wnode.cwl
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: 7cee09fb3e33c851e4e1dfc965c558b82290a785 |
|
|
|
Filter Protein Alignments
|
https://github.com/ncbi/pgap.git
Path: protein_alignment/wf_align_filter.cwl Branch/Commit ID: 7cee09fb3e33c851e4e1dfc965c558b82290a785 |
|
|
|
Filter Protein Seeds; Find ProSplign Alignments
|
https://github.com/ncbi/pgap.git
Path: protein_alignment/wf_compart_filter_prosplign.cwl Branch/Commit ID: 7cee09fb3e33c851e4e1dfc965c558b82290a785 |
