Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	downsample unaligned BAM and align	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: 389f6edccab082d947bee9c032f59dbdf9f7c325
	bam_readcount workflow	https://github.com/fgomez02/analysis-workflows.git Path: definitions/subworkflows/bam_readcount.cwl Branch/Commit ID: 9c9e6a6a48eb321804ce772a2c2c12b4f2f32529
	download_quality_control.cwl	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/sra/download_quality_control.cwl Branch/Commit ID: 4b75136d8aca10fec5bf008191ceaae92b7c46fb
	extract_readgroup_fastq_se_http.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/extract_readgroup_fastq_se_http.cwl Branch/Commit ID: b110a23e2efaaadfd4feca4f9e130946d1c5418d
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: 35e6b3ef71b4a2a9caba1dbd5dc424a8809bcc0a
	process VCF workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/strelka_process_vcf.cwl Branch/Commit ID: 8c4e7372247a7f4ed9ed478ef8ea1d239bc88af0
	cluster_blastp_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 001e133e0eedaf0dd8447e3f8b3cc898ec6e3e1d
	kfdrc_process_pe_set.cwl	https://github.com/kids-first/kf-alignment-workflow.git Path: subworkflows/kfdrc_process_pe_set.cwl Branch/Commit ID: f656d2d32200bee9d3b001af03d5c8b3d5fcb3a7
	kmer_top_n_extract	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_top_n_extract.cwl Branch/Commit ID: b12ec8c8e832151033b9e6c0a76a3c3df18d45da
	conflict.cwl#main	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/conflict.cwl Branch/Commit ID: 814bd0405a7701efc7d63e8f0179df394c7766f7 Packed ID: main