Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
gcaccess_from_list
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_gcaccess_from_list.cwl Branch/Commit ID: f6950321e5c9ee733ad68a273d2ad8e802a6b982 |
|
|
|
Exome QC workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl Branch/Commit ID: 35e6b3ef71b4a2a9caba1dbd5dc424a8809bcc0a |
|
|
|
varscan somatic workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan.cwl Branch/Commit ID: 3a822294da63b4e19446a285e2fef075e23cf3d0 |
|
|
|
Subworkflow that runs cnvkit in single sample mode and returns a vcf file
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 10870aefd20469e728969269ff3c54b3b8339a18 |
|
|
|
bact_get_kmer_reference
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: be465ad19b07378f3f863f2c4e0019b420c859f2 |
|
|
|
phase VCF
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/phase_vcf.cwl Branch/Commit ID: 10870aefd20469e728969269ff3c54b3b8339a18 |
|
|
|
Exome QC workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl Branch/Commit ID: 480c438a6a7e78c624712aec01bc4214d2bc179c |
|
|
|
taxonomy_check_16S
|
https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_taxonomy_check_16S.cwl Branch/Commit ID: b360e89d85d83ba3b863bf86074c0ec7e5c58f48 |
|
|
|
tt_univec_wnode.cwl
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_univec_wnode.cwl Branch/Commit ID: f6950321e5c9ee733ad68a273d2ad8e802a6b982 |
|
|
|
running cellranger mkfastq and count
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: 480c438a6a7e78c624712aec01bc4214d2bc179c |
