Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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bwa_se.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/bwa_se.cwl Branch/Commit ID: ff015418f870bdfbd82ba675eb549fe8b4584b0c |
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fastq_clean_se.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/fastq_clean_se.cwl Branch/Commit ID: ff015418f870bdfbd82ba675eb549fe8b4584b0c |
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count-lines12-wf.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/count-lines12-wf.cwl Branch/Commit ID: 22490926651174c6cbe01c76c2ded3c9e8d0ee6f |
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integrity.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/integrity.cwl Branch/Commit ID: ff015418f870bdfbd82ba675eb549fe8b4584b0c |
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readgroups_bam_to_readgroups_fastq_lists.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/readgroups_bam_to_readgroups_fastq_lists.cwl Branch/Commit ID: ff015418f870bdfbd82ba675eb549fe8b4584b0c |
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fastq_clean_pe.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/fastq_clean_pe.cwl Branch/Commit ID: ff015418f870bdfbd82ba675eb549fe8b4584b0c |
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conditional_markduplicates.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/conditional_markduplicates.cwl Branch/Commit ID: ff015418f870bdfbd82ba675eb549fe8b4584b0c |
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bam-bedgraph-bigwig.cwl
Workflow converts input BAM file into bigWig and bedGraph files |
https://github.com/datirium/workflows.git
Path: workflows/bam-bedgraph-bigwig.cwl Branch/Commit ID: 4b8bb1a1ec39056253ca8eee976078e51f4a954e |
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WGS QC workflow
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https://github.com/mnneveau/cancer-genomics-workflow.git
Path: qc/workflow_wgs.cwl Branch/Commit ID: 5a67e91727c8eb44afff27f9e4774eafef579c58 |
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conditional_bamindex.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/conditional_bamindex.cwl Branch/Commit ID: ff015418f870bdfbd82ba675eb549fe8b4584b0c |
