Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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Detect DoCM variants
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 18600518ce6539a2e29c1707392a4c5da5687fa3 |
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record-in-secondaryFiles-missing-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/record-in-secondaryFiles-missing-wf.cwl Branch/Commit ID: 0e37d46e793e72b7c16b5ec03e22cb3ce1f55ba3 |
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io-any-wf-1.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/io-any-wf-1.cwl Branch/Commit ID: 0e37d46e793e72b7c16b5ec03e22cb3ce1f55ba3 |
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merge-bam-parallel
This workflow merge BAM files per condition in parallel |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/File-formats/merge-bam-parallel.cwl Branch/Commit ID: 3247592a89deafaa0d9c5910a1cb1d000ef9b098 |
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workflow.cwl
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https://github.com/nal-i5k/organism_onboarding.git
Path: flow_dispatch/2working_files/workflow.cwl Branch/Commit ID: 7562bd2c6900b30bce6c6f78951cd76d28218f47 |
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merge and annotate svs with population allele freq and vep
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: 735be84cdea041fcc8bd8cbe5728b29ca3586a21 |
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Varscan Workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: 18600518ce6539a2e29c1707392a4c5da5687fa3 |
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Chipseq alignment for nonhuman with qc and creating homer tag directory
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/chipseq_alignment_nonhuman.cwl Branch/Commit ID: 174f3b239018328cec1d821947438b457552724c |
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default-dir5.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/default-dir5.cwl Branch/Commit ID: 1eb6bfe3c77aebaf69453a669d21ae7a5a78056f |
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bam to trimmed fastqs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq.cwl Branch/Commit ID: 6b365b79675b2aabfb8d5829bb8df0a6e986b037 |