Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: f45b52a24c7b54a75368dcbab24b4eb2c5a9c75a
	mixed_library_metrics.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/dnaseq/mixed_library_metrics.cwl Branch/Commit ID: 2f7c0e92e7b88b57b86602f11c595661c374008a
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: 1249b5d4e23d57ca5e3b8ad6d8e5f10ddb019f68
	xenbase-sra-to-fastq-se.cwl	https://github.com/datirium/workflows.git Path: subworkflows/xenbase-sra-to-fastq-se.cwl Branch/Commit ID: 0ddfca10c41f83bb120c7633e0db9dba7441bca0
	abundance abundace profiles from annotated files, for protein and/or rna	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/abundance-clca.workflow.cwl Branch/Commit ID: f906212e2c9a88280ae36545e5422f25752aa8f4
	umi duplex alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: 72c4c3115956340f35e72cda1fd46ec276f1ca03
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: 70e05adeda8b3b4c77b8947266684ce4305db6ac
	01-qc-se.cwl RNA-seq 01 QC - reads: SE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/RNA-seq_pipeline/01-qc-se.cwl Branch/Commit ID: e019c548a0bc2f17b13365abd213259887069978
	Bisulfite alignment and QC	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: e0b3c76e38630fb6234414b5adebfb6a4fb23117
	transform.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/fastq_readgroup_stats/transform.cwl Branch/Commit ID: 2f7c0e92e7b88b57b86602f11c595661c374008a