Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	EMG assembly for paired end Illumina	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: workflows/emg-assembly.cwl Branch/Commit ID: ca6ca613f0d3728d9589a6ca6293e66dfde87bfb
	minibam_sub_wf.cwl This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!	https://github.com/baminou/OxoG-Dockstore-Tools.git Path: minibam_sub_wf.cwl Branch/Commit ID: 88c5eef2f5ee5c1e878b0476f6e1f74cecf9ec29
	RNASelector as a CWL workflow https://doi.org/10.1007/s12275-011-1213-z	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: workflows/rna-selector.cwl Branch/Commit ID: cff6ca51706f18b1c7052d801d05414f489cec58
	rRNA_selection.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/rRNA_selection.cwl Branch/Commit ID: 85155424fa5654526517369be2fa479a7d4d90de
	transform.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/dnaseq/transform.cwl Branch/Commit ID: b0ff19e4e2944340dca1aceaa20ba10624fa59d0
	kallisto.cwl	https://github.com/KevinSayers/kallisto-nf.git Path: kallisto.cwl Branch/Commit ID: 4c5f1540109c8596b53e9f460cd5f8e57b65db37
	Run genomic CMsearch (5S rRNA)	https://github.com/ncbi-gpipe/pgap.git Path: bacterial_noncoding/wf_gcmsearch.cwl Branch/Commit ID: 0932e4d778ea981cdc19702eab7fc8d572fe8216
	collate_unique_SSU_headers.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: ca6ca613f0d3728d9589a6ca6293e66dfde87bfb
	zip_and_index_vcf.cwl This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.	https://github.com/baminou/OxoG-Dockstore-Tools.git Path: zip_and_index_vcf.cwl Branch/Commit ID: 958b2a392ab2513aa0fbfab558dbf844b549669d
	main.cwl	https://github.com/smc-rna-challenge/zhanghj-9609594.git Path: main.cwl Branch/Commit ID: 9495f778ed203c82c554144f9ae2dc7e3b66378b