Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph cluster_blastp_wnode and gpx_qdump combined

https://github.com/ncbi/pgap.git

Path: task_types/tt_cluster_and_qdump.cwl

Branch/Commit ID: 47ccbd0bc7b45bf8b3c92d0a66c1a9a232367a5d

workflow graph tt_hmmsearch_wnode.cwl

https://github.com/ncbi-gpipe/pgap.git

Path: task_types/tt_hmmsearch_wnode.cwl

Branch/Commit ID: 71e3a42eadc007b66ef4689086530dfc3123d32f

workflow graph exome alignment and somatic variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/somatic_exome_mouse.cwl

Branch/Commit ID: 42c66dd24ce5026d3f717214ddb18b7b4fae93cf

workflow graph scatter-valuefrom-wf4.cwl#main

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf4.cwl

Branch/Commit ID: 819c81af5449ec912bbbbead042ad66b8d3fd8d4

Packed ID: main

workflow graph somatic_subpipeline.cwl

https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git

Path: janis_pipelines/wgs_somatic/cwl/tools/somatic_subpipeline.cwl

Branch/Commit ID: 1d45492ae0085824a7ac532d0dfa6621c1cbe415

workflow graph Modification_workflow.cwl

https://github.com/adamscharlotte/CWL-workflow.git

Path: Modification_workflow.cwl

Branch/Commit ID: af5d00cd0e43fdf914714056a499edf2d61454d4

workflow graph Per-region pindel

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/pindel_cat.cwl

Branch/Commit ID: 2decd55996b912feb48be5db1b052aa3274ee405

workflow graph cat_fastq.cwl

https://github.com/ngs-mstb/micgent.git

Path: python/lib/MICGENT/data/cwl/cat_fastq.cwl

Branch/Commit ID: 0be1abb140bfad17f8a166d0c804fb1e9ad64537

workflow graph Hello World

Puts a message into a file using echo

https://github.com/common-workflow-language/workflows.git

Path: workflows/hello/hello-param.cwl

Branch/Commit ID: 933bf2a1a1cce32d88f88f136275535da9df0954

Packed ID: main

workflow graph Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)

https://github.com/ncbi/pgap.git

Path: bacterial_annot/wf_bacterial_annot_pass1.cwl

Branch/Commit ID: f10de890d1d2271299931349fa8aea660acef4ee