Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph TransDecoder 2 step workflow, running TransDecoder.LongOrfs (step 1) followed by TransDecoder.Predict (step2)

https://github.com/mscheremetjew/workflow-is-cwl.git

Path: workflows/TransDecoder-v5-wf-2steps.cwl

Branch/Commit ID: 72bbd5a80688e6a387bfdff5881db2cc3523f7b7
workflow graph metaspades_pipeline.cwl

https://github.com/EBI-Metagenomics/CWL-assembly.git

Path: cwl/metaspades_pipeline.cwl

Branch/Commit ID: 5a63f965d5809dab3a8f79b5e08361c30ede7900
workflow graph Runs InterProScan on batches of sequences to retrieve functional annotations.

https://github.com/mscheremetjew/workflow-is-cwl.git

Path: workflows/InterProScan-v5-chunked-wf.cwl

Branch/Commit ID: 72bbd5a80688e6a387bfdff5881db2cc3523f7b7
workflow graph analysis.cwl

https://github.com/jsurkont/mirzag.git

Path: tools/analysis.cwl

Branch/Commit ID: b4a38d00a8d6e27540217ac5d590ab8a5da0a92e
workflow graph realign-distr.cwl

https://github.com/Sentieon/Sentieon-cwl.git

Path: stage/realign-distr.cwl

Branch/Commit ID: 845f4699c5fce96a4c708a553b3701c9cf296653
workflow graph dedup-2-pass-distr.cwl

run 2-pass dedup: algo LocusCollector + algo Dedup sequentially in distributed mode

 https://github.com/Sentieon/Sentieon-cwl.git

Path: stage/dedup-2-pass-distr.cwl

Branch/Commit ID: 845f4699c5fce96a4c708a553b3701c9cf296653
workflow graph checker-workflow-wrapping-tool.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: wes-agha-test/checker-workflow-wrapping-tool.cwl

Branch/Commit ID: 120b79b0a64d6e5bec1b00df9fb09d885a2f71a8
workflow graph hc-distr.cwl

https://github.com/Sentieon/Sentieon-cwl.git

Path: stage/hc-distr.cwl

Branch/Commit ID: 845f4699c5fce96a4c708a553b3701c9cf296653
workflow graph Chunked version of phmmer-v3.2.cwl

https://github.com/mscheremetjew/workflow-is-cwl.git

Path: workflows/phmmer-v3.2-chunked-wf.cwl

Branch/Commit ID: e9d078a5874dd5d545116113f5a830915ddd3e1d
workflow graph cram_to_bam workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: cram_to_bam/workflow.cwl

Branch/Commit ID: 6eb7d35ad46207f4ff49e84106b717e17331eb4b